In other highlights, Giovani Lo Celso hit the crossbar with a superb curling shot from outside the area in the first half and Tomas Aranda’s second-half effort was well saved by the Honduras keeper.
Honduras barely crossed the halfway line in the second half as Argentina dominated.
Argentina face Iceland in their final friendly in Auburn, Alabama on Tuesday, before the three-time winners begin their World Cup group games against Algeria in Kansas City on June 17.
Scaloni has hinted that Messi could play a cameo in a friendly, meaning an appearance against Iceland is likely.